I think all the independent priests WANTED/WANT to be independent.
There's lots of reasons for this:
a. The new-sspx has gone more and more extreme (i.e. friendly with new-rome), and some priests don't want any part of it.
b. The sede-movement has gone more and more extreme (with "una cuм") and some priests don't want any part of it.
c. The new-sspx's "property requirements" make working with the sspx problematic for the laity who bought/paid for the properties and don't want the new-sspx to have it.
d. The sede-movement promotes a cult-like attitude where non-sedes are to be kept at a distance, even if family and friends.
There's a reason why priests like Fr Ringrose have stayed independent, at a chapel for decades, to care for souls in a long-term environment. STABILITY is a beautiful thing. Not every priest wants to constantly move around every 1-3 years, as the sspx does. It's not normal; it's not how parishes operated long ago. Moving like this is also harder when you decreasingly trust the leadership.
Of course, there are obvious reasons why some priests want to be independent (i.e. Fr Pfeiffer, who is a control freak) and run their own show. Such is human nature and has been around since the dawn of time.
But with the increased extremism of the 2 major Trad movements, some priests just want to do their job and stay out of the politics. Nothing wrong with this. In fact, such attitudes were more common in the 70s/80s, when Traditionalism was growing. Independence, just like in politics, offers a freedom and a stability. "Following the crowd" and "group-think", which are prevalent mindsets of our modern age, lead to unnecessary fighting, unnecessary rules and unnecessary stress.
Then you have the actions of many Trad Bishops who impose rules which are not-canonical ("una cuм"), arbitrary ("belief in novus ordo miracles"), and downright controlling ("I'll ordain you if you do what I say"). Canon law is meant to protect priests from controlling bishops, just as much as it is meant to help good Bishops govern their dioceses. But, if we look at the "modern age" of Traditionalism (i.e. 1990s - onward, post +ABL), there is a growing attitude among Trad Bishops of being "in charge" vs the attitude of being a facilitator, a helper, a provider of sacraments.
In this sense, I think +Williamson's instinct to make the Resistance less-autonomous was correct. I'm sure he experienced all kinds of petty, stupid and narcissistic behavior at the hands of sspx district superiors in his day, which made his job harder to do as a seminary leader. And, ultimately, this is the reason he was kicked out - because he wouldn't follow stupid rules, from stupid people. Thus, when creating the Resistance, I see the wisdom in making it de-centralized, to try to return to the 70s/80s style.
And it may have worked, had Pfeiffer/Pablo not engaged a fight and gave the Resistance a bad name. On the other hand, to "start from scratch" is extremely difficult and I think people underestimate the work, time and $ that it takes to build an organization...one which is international.
There will always be priests/religious who are independent by nature. Some of the greatest religious organizations were formed by such people. Some people just work better alone. +W's instincts to make the Resistance different from the new-sspx were both of necessity (i.e. lack of resources) and also of purpose (i.e. less bureaucratic). It is what it is, because God allowed such to happen (or not happen). God is in control, He sees the future and knows what's best. Let us not forget His Divine Providence governs things down to the smallest detail - ESPECIALLY in matters of religion. Everything has happened for a reason.